15–18 Jul 2024
ESRF Auditorium
Europe/Paris timezone

Assembling and rigidifying DNA macromolecules by ionic liquids

16 Jul 2024, 14:50
20m
ESRF Auditorium

ESRF Auditorium

Speaker

Prof. Sajal Kumar Ghosh (Shiv Nadar Institution of Eminence)

Description

Deoxyribonucleic acid (DNA) is a negatively charged bio-macromolecule that helps in the transmission of genetic information for the growth and functioning of a living organism. Therefore, it is considered as a potential tool in gene therapeutics. Packing or condensing of this macromolecule is difficult because of the intra and intermolecular repulsive electrostatic and entropic interactions. Even though there are reports of condensing the molecule using inorganic salts in bulk aqueous medium, the assembly at the air-water interface is rarely reported. Here, we report the assembly of the DNA molecule at the interface induced by an imidazolium based ionic liquid (IL) 1,3 didecyl-2-methylimidazolium chloride. The surface pressure-area isotherm ensures the presence of the molecule at the interface with a high mean molecular area. Interfacial rheology measurements quantify the elastic nature of the molecular film. The storage and loss modulus of the film is found to strongly depend on the in-plane pressure. Advanced in-situ synchrotron X-ray reflectivity (XRR) study relates these physical properties of the film with its structure. The electron density profile of the film across the interface manifests the compact nature of the film in presence of the IL. This work suggests an easy way of immobilizing the DNA macromolecule at the air-water interface. The work has been extended to bulk aqueous solution of DNA in presence of the organic salt. Small angle X-ray scattering (SAXS) results indicate rigidification of the DNA strands in presence of the IL which is opposite of what is reported for an inorganic salt. Computational analysis of the work has provided the molecular details of this exceptional behavior in presence of the organic salt.

Please select the related topic from the list below Thin films and interfaces in soft matter and materials science

Primary authors

Prof. Sajal Kumar Ghosh (Shiv Nadar Institution of Eminence) Ms Gunjan Sharma (Shiv Nadar Institution of Eminence)

Co-authors

Dr Ritika Gupta (Shiv Nadar Institution of Eminence) Mr Tommaso Temperini (University of Rome "La Sapienza") Dr Rajendra Prasad Giri (Kiel University) Dr Bridget Murphy (Kiel University) Prof. Cristiano De Michele (University of Rome "La Sapienza")

Presentation materials

There are no materials yet.